Diagnostics plots - ESS and Rhat.

diagnosticsPlot(theta_aligned, beta_aligned, iterUse = 1000, chain = 4)

Arguments

theta_aligned

array. Three dimensional array returned by thetaAligned().

beta_aligned

array. Three dimensional array returned by betaAligned().

iterUse

integer. number of iterations used in each chain after subtracting warm-up samples.

chain

integer. number of chains used in MCMC.

Value

list. ggplots of effective sample size and rhat plots.