voom
asinhVoom.Rd
Computes the observation level weight based on the mean-variance relationship.
asinhVoom(counts, design = NULL, sj, span = 0.5, plot = FALSE)
counts | A numeric matrix of otu_table. |
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design | A design matrix with rows corresponding to samples and columns to coefficients to be estimated. Defaults to the unit vector meaning that samples are treated as replicates. |
sj | A numeric vector containing library size normalization factor based on the median-ratio method. |
span | A numeric. Width of the lowess smoothing window as a proportion. |
plot | A logical, should a plot of the mean-variance trend be displayed? |
A matrix of variance stablized counts.