alphaBetaContInPlasma.RdGiven the estimated gamma distribution parameters for the intensity of contamination in negative control samples, alphaBetaContInPlasma
computes the
gamma distribution parameters in the plasma sample using the scaling
property of the gamma distribution.
alphaBetaContInPlasma(psPlByBlock, psallzeroInNC, blk, alphaBetaNegControl)
| psPlByBlock | A list of phyloseq objects with plasma samples. |
|---|---|
| psallzeroInNC | A list of phyloseq objects with all taxa with no prevalence in negative control samples. |
| blk | Numeric, which block samples to be used. |
| alphaBetaNegControl | A list of estimated distribution parameters for the intensity of contamination in negative control samples returned by |
A list of estimated distribution parameters for the intensity of contamination in the plasma samples in a selected block.
If all the samples are from one block, create a variable with one block level.